CRAN Package Check Results for Package MASS

Last updated on 2017-01-23 15:48:03.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 7.3-45 10.05 47.92 57.97 ERROR
r-devel-linux-x86_64-debian-gcc 7.3-45 20.43 48.69 69.13 OK
r-devel-linux-x86_64-fedora-clang 7.3-45 54.20 OK --no-stop-on-test-error
r-devel-linux-x86_64-fedora-gcc 7.3-45 52.03 OK --no-stop-on-test-error
r-devel-macos-x86_64-clang 7.3-45 85.94 OK --no-stop-on-test-error
r-devel-windows-ix86+x86_64 7.3-45 33.00 106.00 139.00 ERROR
r-patched-linux-x86_64 7.3-45 7.42 48.75 56.18 ERROR
r-patched-solaris-sparc 7.3-45 OK
r-patched-solaris-x86 7.3-45 OK
r-release-linux-x86_64 7.3-45 11.51 48.23 59.74 OK
r-release-osx-x86_64-mavericks 7.3-45 OK
r-release-windows-ix86+x86_64 7.3-45 44.00 127.00 171.00 ERROR
r-oldrel-windows-ix86+x86_64 7.3-45 51.00 135.00 186.00 ERROR

Check Details

Version: 7.3-45
Check: tests
Result: ERROR
     Running ‘confint.R’ [0s/0s]
     Running ‘fitdistr.R’ [0s/0s]
     Comparing ‘fitdistr.Rout’ to ‘fitdistr.Rout.save’ ... OK
     Running ‘glm.nb.R’ [0s/0s]
     Running ‘hubers.R’ [0s/0s]
     Running ‘lme.R’ [0s/0s]
    Running the tests in ‘tests/lme.R’ failed.
    Last 13 lines of output:
     > ## stepAIC on an lme object: an example from Robert Cuffe
     > library(nlme)
     > library(MASS)
     > set.seed(321) # to be sure
     > a <- data.frame( resp=rnorm(250), cov1=rnorm(250),
     + cov2=rnorm(250), group=rep(letters[1:10],25) )
     > mod1 <- lme(resp~cov1, a, ~cov1|group, method="ML")
     > mod2 <- stepAIC(mod1, scope=list(upper=~(cov1+cov2)^2, lower=~1) )
     Start: AIC=700.38
     resp ~ cov1
    
     Error in deviance.lme(x) :
     not yet implemented. Contributions are welcome (should be compatible with lme4's)
     Calls: stepAIC -> mydeviance -> deviance -> deviance.lme
     Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-patched-linux-x86_64

Version: 7.3-45
Check: running tests for arch ‘i386’
Result: ERROR
     Running 'confint.R' [0s]
     Running 'fitdistr.R' [0s]
     Comparing 'fitdistr.Rout' to 'fitdistr.Rout.save' ... OK
     Running 'glm.nb.R' [0s]
     Running 'hubers.R' [0s]
     Running 'lme.R' [1s]
    Running the tests in 'tests/lme.R' failed.
    Last 13 lines of output:
     > ## stepAIC on an lme object: an example from Robert Cuffe
     > library(nlme)
     > library(MASS)
     > set.seed(321) # to be sure
     > a <- data.frame( resp=rnorm(250), cov1=rnorm(250),
     + cov2=rnorm(250), group=rep(letters[1:10],25) )
     > mod1 <- lme(resp~cov1, a, ~cov1|group, method="ML")
     > mod2 <- stepAIC(mod1, scope=list(upper=~(cov1+cov2)^2, lower=~1) )
     Start: AIC=700.38
     resp ~ cov1
    
     Error in deviance.lme(x) :
     not yet implemented. Contributions are welcome (should be compatible with lme4's)
     Calls: stepAIC -> mydeviance -> deviance -> deviance.lme
     Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 7.3-45
Check: running tests for arch ‘x64’
Result: ERROR
     Running 'confint.R' [0s]
     Running 'fitdistr.R' [0s]
     Comparing 'fitdistr.Rout' to 'fitdistr.Rout.save' ... OK
     Running 'glm.nb.R' [1s]
     Running 'hubers.R' [0s]
     Running 'lme.R' [1s]
    Running the tests in 'tests/lme.R' failed.
    Last 13 lines of output:
     > ## stepAIC on an lme object: an example from Robert Cuffe
     > library(nlme)
     > library(MASS)
     > set.seed(321) # to be sure
     > a <- data.frame( resp=rnorm(250), cov1=rnorm(250),
     + cov2=rnorm(250), group=rep(letters[1:10],25) )
     > mod1 <- lme(resp~cov1, a, ~cov1|group, method="ML")
     > mod2 <- stepAIC(mod1, scope=list(upper=~(cov1+cov2)^2, lower=~1) )
     Start: AIC=700.38
     resp ~ cov1
    
     Error in deviance.lme(x) :
     not yet implemented. Contributions are welcome (should be compatible with lme4's)
     Calls: stepAIC -> mydeviance -> deviance -> deviance.lme
     Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 7.3-45
Check: running tests for arch ‘i386’
Result: ERROR
    Running the tests in 'tests/lme.R' failed.
    Last 13 lines of output:
     > library(MASS)
     > set.seed(321) # to be sure
     > a <- data.frame( resp=rnorm(250), cov1=rnorm(250),
     + cov2=rnorm(250), group=rep(letters[1:10],25) )
     > mod1 <- lme(resp~cov1, a, ~cov1|group, method="ML")
     > mod2 <- stepAIC(mod1, scope=list(upper=~(cov1+cov2)^2, lower=~1) )
     Start: AIC=700.38
     resp ~ cov1
    
     Error in deviance.lme(x) :
     not yet implemented. Contributions are welcome (should be compatible with lme4's)
     Calls: stepAIC -> mydeviance -> deviance -> deviance.lme
     Execution halted
Flavors: r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 7.3-45
Check: running tests for arch ‘x64’
Result: ERROR
    Running the tests in 'tests/lme.R' failed.
    Last 13 lines of output:
     > library(MASS)
     > set.seed(321) # to be sure
     > a <- data.frame( resp=rnorm(250), cov1=rnorm(250),
     + cov2=rnorm(250), group=rep(letters[1:10],25) )
     > mod1 <- lme(resp~cov1, a, ~cov1|group, method="ML")
     > mod2 <- stepAIC(mod1, scope=list(upper=~(cov1+cov2)^2, lower=~1) )
     Start: AIC=700.38
     resp ~ cov1
    
     Error in deviance.lme(x) :
     not yet implemented. Contributions are welcome (should be compatible with lme4's)
     Calls: stepAIC -> mydeviance -> deviance -> deviance.lme
     Execution halted
Flavors: r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64