Classes and functions for genetic data analysis within the multivariate framework.
| Version: | 1.3-8 |
| Depends: | R (≥ 2.10), methods, MASS, ade4, igraph, ape |
| Suggests: | genetics, spdep, tripack, pegas, seqinr, adehabitat, multicore, akima, maps, splancs, hierfstat |
| Published: | 2013-05-15 |
| Author: | Thibaut Jombart, Ismail Ahmed, Federico Calboli, Anne Cori, Tobias Erik Reiners, Peter Solymos |
| Maintainer: | Thibaut Jombart <t.jombart at imperial.ac.uk> |
| License: | GPL (≥ 2) |
| NeedsCompilation: | yes |
| Citation: | adegenet citation info |
| In views: | Genetics |
| CRAN checks: | adegenet results |
| Package source: | adegenet_1.3-8.tar.gz |
| MacOS X binary: | adegenet_1.3-8.tgz |
| Windows binary: | adegenet_1.3-8.zip |
| Reference manual: | adegenet.pdf |
| Vignettes: |
An introduction to the adegenet package An introduction to Discriminant Analysis of Principal Components (DAPC) Analysing genome-wide SNP data using adegenet A tutorial for spatial Analysis of Principal Components |
| News/ChangeLog: | ChangeLog |
| Old sources: | adegenet archive |
| Reverse depends: | adephylo, coalescentMCMC, epibase, mmod, outbreaker, pegas, PopGenReport, poppr |
| Reverse imports: | poppr |
| Reverse suggests: | hierfstat, polysat |