KnockoffHybrid: Hybrid Analysis of Population and Trio Data with Knockoff Statistics for FDR Control

Identification of putative causal variants in genome-wide association studies using hybrid analysis of both the trio and population designs. The package implements the method in the paper: Yang, Y., Wang, Q., Wang, C., Buxbaum, J., & Ionita-Laza, I. (2024). KnockoffHybrid: A knockoff framework for hybrid analysis of trio and population designs in genome-wide association studies. The American Journal of Human Genetics, in press.

Version: 1.0.1
Depends: R (≥ 2.10)
Imports: glmnet, SPAtest
Published: 2024-06-11
DOI: 10.32614/CRAN.package.KnockoffHybrid
Author: Yi Yang ORCID iD [aut, cre]
Maintainer: Yi Yang <yi.yang at cityu.edu.hk>
License: GPL-3
NeedsCompilation: no
Materials: README
CRAN checks: KnockoffHybrid results

Documentation:

Reference manual: KnockoffHybrid.pdf

Downloads:

Package source: KnockoffHybrid_1.0.1.tar.gz
Windows binaries: r-devel: not available, r-release: KnockoffHybrid_1.0.0.zip, r-oldrel: KnockoffHybrid_1.0.1.zip
macOS binaries: r-release (arm64): KnockoffHybrid_1.0.1.tgz, r-oldrel (arm64): KnockoffHybrid_1.0.1.tgz, r-release (x86_64): KnockoffHybrid_1.0.1.tgz, r-oldrel (x86_64): KnockoffHybrid_1.0.1.tgz
Old sources: KnockoffHybrid archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=KnockoffHybrid to link to this page.